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muscle (multiple sequence comparison by log- expectation)  (STARR Life Sciences)

 
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    STARR Life Sciences muscle (multiple sequence comparison by log- expectation)
    NTD-associated missense variants in HECTD1 . a Domain structure of HECTD1 showing armadillo (ARM, orange) and ankyrin repeats (ANK, blue), Sad1/UNC (SUN, yellow), mind-bomb domain (MIB, green), Basic Tilted Helix Bundle (BTHB, light blue), and Homologous to the E6-AP Carboxyl Terminus domain (HECT, red) domains. The position of human NTD-associated missense variants and the putative benign p.P2474L variant are indicated. b <t>The</t> <t>multiple-sequence</t> protein alignment was done using <t>MUSCLE.</t> The amino acid sequences adjacent to the NTD-associated missense variants are shown in the various HECTD1 orthologues. Sequences were obtained through Blastp. The accession numbers, % query coverage, and E -value are listed in Table . The amino acids altered by missense variants are absolutely conserved among vertebrates, with some conservation into invertebrate taxonomic groups
    Muscle (Multiple Sequence Comparison By Log Expectation), supplied by STARR Life Sciences, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/muscle+%28multiple+sequence+comparison+by+log-+expectation%29/pmc11043113-135-9-23?v=STARR+Life+Sciences
    Average 90 stars, based on 1 article reviews
    muscle (multiple sequence comparison by log- expectation) - by Bioz Stars, 2026-07
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    1) Product Images from "Identification and functional analysis of rare HECTD1 missense variants in human neural tube defects"

    Article Title: Identification and functional analysis of rare HECTD1 missense variants in human neural tube defects

    Journal: Human Genetics

    doi: 10.1007/s00439-024-02647-4

    NTD-associated missense variants in HECTD1 . a Domain structure of HECTD1 showing armadillo (ARM, orange) and ankyrin repeats (ANK, blue), Sad1/UNC (SUN, yellow), mind-bomb domain (MIB, green), Basic Tilted Helix Bundle (BTHB, light blue), and Homologous to the E6-AP Carboxyl Terminus domain (HECT, red) domains. The position of human NTD-associated missense variants and the putative benign p.P2474L variant are indicated. b The multiple-sequence protein alignment was done using MUSCLE. The amino acid sequences adjacent to the NTD-associated missense variants are shown in the various HECTD1 orthologues. Sequences were obtained through Blastp. The accession numbers, % query coverage, and E -value are listed in Table . The amino acids altered by missense variants are absolutely conserved among vertebrates, with some conservation into invertebrate taxonomic groups
    Figure Legend Snippet: NTD-associated missense variants in HECTD1 . a Domain structure of HECTD1 showing armadillo (ARM, orange) and ankyrin repeats (ANK, blue), Sad1/UNC (SUN, yellow), mind-bomb domain (MIB, green), Basic Tilted Helix Bundle (BTHB, light blue), and Homologous to the E6-AP Carboxyl Terminus domain (HECT, red) domains. The position of human NTD-associated missense variants and the putative benign p.P2474L variant are indicated. b The multiple-sequence protein alignment was done using MUSCLE. The amino acid sequences adjacent to the NTD-associated missense variants are shown in the various HECTD1 orthologues. Sequences were obtained through Blastp. The accession numbers, % query coverage, and E -value are listed in Table . The amino acids altered by missense variants are absolutely conserved among vertebrates, with some conservation into invertebrate taxonomic groups

    Techniques Used: Variant Assay, Sequencing



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    Image Search Results


    NTD-associated missense variants in HECTD1 . a Domain structure of HECTD1 showing armadillo (ARM, orange) and ankyrin repeats (ANK, blue), Sad1/UNC (SUN, yellow), mind-bomb domain (MIB, green), Basic Tilted Helix Bundle (BTHB, light blue), and Homologous to the E6-AP Carboxyl Terminus domain (HECT, red) domains. The position of human NTD-associated missense variants and the putative benign p.P2474L variant are indicated. b The multiple-sequence protein alignment was done using MUSCLE. The amino acid sequences adjacent to the NTD-associated missense variants are shown in the various HECTD1 orthologues. Sequences were obtained through Blastp. The accession numbers, % query coverage, and E -value are listed in Table . The amino acids altered by missense variants are absolutely conserved among vertebrates, with some conservation into invertebrate taxonomic groups

    Journal: Human Genetics

    Article Title: Identification and functional analysis of rare HECTD1 missense variants in human neural tube defects

    doi: 10.1007/s00439-024-02647-4

    Figure Lengend Snippet: NTD-associated missense variants in HECTD1 . a Domain structure of HECTD1 showing armadillo (ARM, orange) and ankyrin repeats (ANK, blue), Sad1/UNC (SUN, yellow), mind-bomb domain (MIB, green), Basic Tilted Helix Bundle (BTHB, light blue), and Homologous to the E6-AP Carboxyl Terminus domain (HECT, red) domains. The position of human NTD-associated missense variants and the putative benign p.P2474L variant are indicated. b The multiple-sequence protein alignment was done using MUSCLE. The amino acid sequences adjacent to the NTD-associated missense variants are shown in the various HECTD1 orthologues. Sequences were obtained through Blastp. The accession numbers, % query coverage, and E -value are listed in Table . The amino acids altered by missense variants are absolutely conserved among vertebrates, with some conservation into invertebrate taxonomic groups

    Article Snippet: A multiple sequence alignment was performed (Fig. b) utilizing MUSCLE (MUltiple Sequence Comparison by Log- Expectation) to align the sequences of selected species (Starr and Fridolfsson ).

    Techniques: Variant Assay, Sequencing